Scipediacontent: Scipediacontent moved page Draft Content 566811465 to Andrey et al 2017a

2021-01-25T10:04:19Z

Scipediacontent moved page Draft Content 566811465 to Andrey et al 2017a

Scipediacontent: Created page with " == Abstract == With the progress of microscopy techniques and the rapidly growing amounts of acquired imaging data, there is an increased need for automated image processing..."

2021-01-25T10:04:16Z

Created page with " == Abstract == With the progress of microscopy techniques and the rapidly growing amounts of acquired imaging data, there is an increased need for automated image processing..."

New page

== Abstract ==

With the progress of microscopy techniques and the rapidly growing amounts of acquired imaging data, there is an increased need for automated image processing and analysis solutions in biological studies. Each new application requires the design of a specific image analysis pipeline, by assembling a series of image processing operations. Many commercial or free bioimage analysis software are now available and several textbooks and reviews have presented the mathematical and computational fundamentals of image processing and analysis. Tens, if not hundreds, of algorithms and methods have been developed and integrated into image analysis software, resulting in a combinatorial explosion of possible image processing sequences. This paper presents a general guideline methodology to rationally address the design of image processing and analysis pipelines. The originality of the proposed approach is to follow an iterative, backwards procedure from the target objectives of analysis. The proposed goal-oriented strategy should help biologists to better apprehend image analysis in the context of their research and should allow them to efficiently interact with image processing specialists.

== Original document ==

The different versions of the original document can be found in:

* [http://dx.doi.org/10.1007/978-1-4939-6810-7_13 http://dx.doi.org/10.1007/978-1-4939-6810-7_13]

* [https://hal.inrae.fr/hal-02788784 https://hal.inrae.fr/hal-02788784]

* [http://link.springer.com/content/pdf/10.1007/978-1-4939-6810-7_13 http://link.springer.com/content/pdf/10.1007/978-1-4939-6810-7_13],
: [http://dx.doi.org/10.1007/978-1-4939-6810-7_13 http://dx.doi.org/10.1007/978-1-4939-6810-7_13] under the license http://www.springer.com/tdm

* [https://link.springer.com/protocol/10.1007/978-1-4939-6810-7_13 https://link.springer.com/protocol/10.1007/978-1-4939-6810-7_13],
: [https://www.ncbi.nlm.nih.gov/pubmed/28324610 https://www.ncbi.nlm.nih.gov/pubmed/28324610],
: [https://europepmc.org/abstract/MED/28324610 https://europepmc.org/abstract/MED/28324610],
: [https://rd.springer.com/protocol/10.1007/978-1-4939-6810-7_13 https://rd.springer.com/protocol/10.1007/978-1-4939-6810-7_13],
: [https://link.springer.com/protocol/10.1007/978-1-4939-6810-7_13/fulltext.html https://link.springer.com/protocol/10.1007/978-1-4939-6810-7_13/fulltext.html],
: [https://academic.microsoft.com/#/detail/2599106206 https://academic.microsoft.com/#/detail/2599106206]

← Older revision	Revision as of 10:04, 25 January 2021
(No difference)

Andrey et al 2017a - Revision history

Scipediacontent: Scipediacontent moved page Draft Content 566811465 to Andrey et al 2017a

Scipediacontent: Created page with " == Abstract == With the progress of microscopy techniques and the rapidly growing amounts of acquired imaging data, there is an increased need for automated image processing..."